neat.CompartmentFitter.check_passive

CompartmentFitter.check_passive(loc_arg, alpha_inds=[0], use_all_channels_for_passive=True, force_tau_m_fit=False, pprint=False)

Checks the impedance kernels of the passive model.

Parameters:

• loc_arg (list of locations or string (see documentation of) – MorphTree.convert_loc_arg_to_locs() for details) The compartment locations

• alpha_inds (list of ints) – Indices of all mode time-scales to be included in the fit

• n_modes (int) – The number of eigen modes that are shown

• use_all_channels_for_passive (bool) – Uses all channels in the tree to compute coupling conductances

• force_tau_m_fit (bool) – Force using the local membrane time-scale for capacitance fit

• pprint (bool) – is verbose if True